p27 (Kip1) role as a transcriptional regulator

p27, also called Kip1, is a well known protein with a crucial role in cell cycle progression and cancer. p27 best known function is the inhibition of cyclin-dependent kinase (cdk) activities, cyclin E-CDK2 and cyclin D-CDK4 complexes, and has a role in controlling the cell cycle progression at G1. However it was unclear if p27 may have other roles in the nucleus other than acting as a CDK inhibitor.

paper published this week in Oncogene shows that p27 has also a role as a transcriptional repressor, which is independent of cyclin-cdk regulation. This work has been leaded by Oriol Bachs and Raffy Pippa from IDIBAPS, and we, Gunes and myself, and other researchers from IMIMCIEMAT and University of Toulouse have participated in the project.

Model illustrating the participation of p27 on the organization of p130/E2F4 repressor complexes. p130 first drives E2F4 to the promoters, then p27 is subsequently loaded by directly interacting by its carboxyl-domain with both p130 and E2F4. Finally, p27 recruits the co-repressors HDAC1 and mSIN3A on these promoters.

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Histone-modifying Enzymes Coregulated in Cancer – a phenomena that can be used for better drug design

4 of the 5 participants in the project, from left to right: Liza, Laura, William and Khademul

Recently epigenetic modifications have drawn lots of attention in the oncology field. Cancer is characterized by aberrant patterns of gene expression of multiple genes. These major shifts in gene expression are believed to be due to genetic and epigenetic changes. Read the rest of this entry »

SVGMap: Configurable image browser for experimental data

Have you ever heard of SVG? Scalable Vector Graphics (SVG) is an open standard to design images and graphics that can be scaled to any size without loosing quality. SVG is also the focus of a tool that we have developed in our group to cover specific needs of a collaborative project with an experimental group. The need was to visualize the spatial distribution of the expression of selected genes in different tissues and cell types. Read the rest of this entry »